ssr_primer
Primer Details for TRINITY_DN74817_c1_g2_i5 |
|---|
| (A)10: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCATGGAGGAAAGGGGTGAC | CTGATCGCAAGGCCTGAAGA | Start: 1755 |
| Tm | 60.034 | 60.108 | End: 1938 |
| Size | 20 | 20 | 184 |
| Primer 2 details |
|---|
| Sequence | GAGGAAAGGGGTGACAAGGG | CTGATCGCAAGGCCTGAAGA | Start: 1760 |
| Tm | 59.962 | 60.108 | End: 1938 |
| Size | 20 | 20 | 179 |
| Primer 3 details |
|---|
| Sequence | GGAGGAAAGGGGTGACAAGG | CTGATCGCAAGGCCTGAAGA | Start: 1759 |
| Tm | 59.962 | 60.108 | End: 1938 |
| Size | 20 | 20 | 180 |
| Primer 4 details |
|---|
| Sequence | CCATGGAGGAAAGGGGTGAC | CTGTTGGCACTGATCGCAAG | Start: 1755 |
| Tm | 60.034 | 59.833 | End: 1947 |
| Size | 20 | 20 | 193 |
| Primer 5 details |
|---|
| Sequence | TCTTCAGGCCTTGCGATCAG | CGCATAACACGGCCTTTCTG | Start: 1919 |
| Tm | 60.108 | 59.903 | End: 2135 |
| Size | 20 | 20 | 217 |
(TATT)4(TATTTTTTTTTGTAGCAAATTATGATTCTTTTCGATCCATGGAGGAAAGGGGTGACAAGGGTCTGCTTCTTGTGGTTTTCTCTTTCATATCTTAACTCATTTTCTTCCATTCTATGCCAACATTTCTATCTGGTCTTCTTAAATGGCAAGAACAATTAGGAAATAACTCAGTCCTCCATCATAACTTGAAACCTTGAATATCTTCAGGCCTTGCGATCAGTGCCAACAGGCCACTTCTCTCACCTTGCAACAGTGAGAAAGTTTGAAATCACAATTTTTCAAGTTCATTTTGATTTTTAAAAACTTATCAGGGCCAGTTTGACCGGAAGAAAAATGAGTGGAAATGAAAAAGAGGCCCAACACTCAATGCTAATATTAAGCTGTGCTTTTACTTTCACAGAAAGGCCGTGTTATGCGGCACAGAATTAAATCTTCAAGAATAATCAAACATTTACAAAACTGAGTCAATGACTCAAATAGTAGAATTTCTAGTATTATTAATCAATACAGTCTTAAAAATTATTTTACATTGTATAATCTTACACATGTTGATGCTTAATGCAAAAAATGTGTATCTCAATTGCAACATTTAGAAAGCTCCACTTATGTTTTATTCTCTTCAAGGAGAACTAATCAAAATTGTTAATTGCAATTTTGCGTGATTTTTTTAGAATAAGTGAAAAAATCCCTAAAAAATTACAGTAAAAATTGTTGGTCACTTCTCCTTTAAAAGGGTAAAACATGAGGAGTGACTTACAATGTTCTAATCTAAGATTTACATATTTTGACTATAGCCATGGATATACCATCAAATAATACAAAAAATAATTTTATTTTATTAGCTTGTCCATAAAGTTAATGAATCTATCGTTAGTTTCAACGTTACTCGCATGACAGCTCTCATACGTTCAAGATTTTAGCAGAAATGTTCAAATTAGAAAGGAAAACGCTCGTGATTCTTTTTTAATTCGTCTGTGGAAGTAAAAGTGCATTGTATTTTTTGTACCTGGTCACTGTTTTTTATTCGTTCAGTATTCGTTGTATTTGTTATTTGAAAATTTTCACTGCTTGCTGTTAATACTCTCTTCTAAATCTGTCCTCTTTTCTATATAAAATATAATAAAGTCATTAGTGTAAAGTATTCTGAAGGATACTTCTACACTCTTATATTTTGCCAGAAGATGATTCTTGACTCTTGCCTCATTCTATACTTATAGAGTGGATACCACAGGGATATCCAAAATTTATTGTATTATTGTGGTCAAGAATCAGAACTGTAATGAGTTACACTGTCTCGATGTAGAGTTCTGAATTTTTCTGTGATAAAAAATTTAATTATCTTGTCTCAAGATGCTGTGAAAGTCTCAGTAGAGGAGGTCTGCAAATATTATTGCCTAGTTTTTATCAGTATTTTAGGAAAAGGGCTGTTTTAGCTATCGGGTTTTATGTGGAAGTTTTATCGGCCCTCATACACCTCTGATTTTTCTTAAATATTTCTTTGAAAAATAGACCCAGGTAGCAAATCATTCCTTACATGATCTGACTTGTATTCACTTCAAAAATCTAAGCAGTCAGATGTCTTCTTGATGCCCATTCACTCCAAAAAGAGGAAAAACGTTTGTTTCCATCTGTTTAATGGGTTAGACTCCTTCATGAAAAGTAAAAAAAAAAATGACCTCTACCTCCTGGGTTTCTAACTACTTCTCCATTTACCGTGTTCAGAAAACATGGTAAGAGTTTAAGTACTCATGAAATATTTCAAAATGAGACACGTCACATAATTATACGCATCTAGTGTGAGATCCTCTTTTCCTGTATGATATTTTAATGATACATTAATTTGGATACATTTTGACCATCTGTCAGTTTCCCCCCTAATTCTTGCCGAAAGCTCTTTCATTTTATTTGGTTTAACTTTCAAAATGTTGAACAAATAGTCTCACCAAGTTTTTCCAATCTTTATTGAGTATGAGAGGTATGGGTGAATTAATCAAACAATATATGTGGCCAGACAATTAAGTTCCTATCCAACAATTCAGTTCCCTCAGATATTTATATTTAAATGAAAACATTTTTTTCTTTCATCTTTAGGATGCCCCTAAGTAAAAAGTAGCCCAGTCGCTAGATTTCTTCCTCTTCGGCCCCCTTCTCTCTCCTCCCCCTCTACTCTTTTGGTCGATAATTCCAATCATTTTTTTCCGGTGTAGGCGTGGAGAAGTTAGTTACTCAAGTTTTATTTTCTGATGCATGTCTTTTTTCTCTATTTTCTTCTTTCTTTCTTTGTAAATTTGAAAGTAATTGAAGGATCGTCATCACCGCAGAATCTTGTCACAAGATGATTCTTTCATTCATCAGTTCTTAATCAAAACAACTAAGAAAATATGAAAGAATGATAAATAATCTAAACTAGGTATTTACTGTAGCATCGTCAATTATCCTGGGACGTCACAGTTGAGAAGTAATGAAATCATTTTGTTTGTTTCTTGTGGTATGACTGTTTTTACAGGGAGACTGTATAACTTTTAATTGATTCTGACCCCATGTAAAATATACCCGAAGTGCCTATTTTGAAAAATTTGCACCTAAAACATCATCAATTTTACCTGTCGGTAATTGCTTGAGAGCCTCAGCCAGCACTGCTCTGACCAACAGTAGAAGAAAAAAACATTGATTTAATGTTTCTCAATTCTCGCAGAGCATCAAATTTTATCTTAGGTATTGTACTAATGCTTGCCACTTGGAAAATGTTTGAACTTAAATTTTTCAAAAATACTGCCGCTTGGAAGAGAACTGCTGCAGTCAATACATGCATATTGAAAGAGCCAGGAATGAGTCGTGTCCATCAGTAGTTAAATTGAGTCTAGTGATGATCTTGAATTTTGATGTCAACTCTTCATAT)(T)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCATGGAGGAAAGGGGTGAC | CTGATCGCAAGGCCTGAAGA | Start: 1755 |
| Tm | 60.034 | 60.108 | End: 1938 |
| Size | 20 | 20 | 184 |
| Primer 2 details |
|---|
| Sequence | GAGGAAAGGGGTGACAAGGG | CTGATCGCAAGGCCTGAAGA | Start: 1760 |
| Tm | 59.962 | 60.108 | End: 1938 |
| Size | 20 | 20 | 179 |
| Primer 3 details |
|---|
| Sequence | GGAGGAAAGGGGTGACAAGG | CTGATCGCAAGGCCTGAAGA | Start: 1759 |
| Tm | 59.962 | 60.108 | End: 1938 |
| Size | 20 | 20 | 180 |
| Primer 4 details |
|---|
| Sequence | CCATGGAGGAAAGGGGTGAC | CTGTTGGCACTGATCGCAAG | Start: 1755 |
| Tm | 60.034 | 59.833 | End: 1947 |
| Size | 20 | 20 | 193 |
| Primer 5 details |
|---|
| Sequence | TCTTCAGGCCTTGCGATCAG | CGCATAACACGGCCTTTCTG | Start: 1919 |
| Tm | 60.108 | 59.903 | End: 2135 |
| Size | 20 | 20 | 217 |
(A)11: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCATGGAGGAAAGGGGTGAC | CTGATCGCAAGGCCTGAAGA | Start: 1755 |
| Tm | 60.034 | 60.108 | End: 1938 |
| Size | 20 | 20 | 184 |
| Primer 2 details |
|---|
| Sequence | GAGGAAAGGGGTGACAAGGG | CTGATCGCAAGGCCTGAAGA | Start: 1760 |
| Tm | 59.962 | 60.108 | End: 1938 |
| Size | 20 | 20 | 179 |
| Primer 3 details |
|---|
| Sequence | GGAGGAAAGGGGTGACAAGG | CTGATCGCAAGGCCTGAAGA | Start: 1759 |
| Tm | 59.962 | 60.108 | End: 1938 |
| Size | 20 | 20 | 180 |
| Primer 4 details |
|---|
| Sequence | CCATGGAGGAAAGGGGTGAC | CTGTTGGCACTGATCGCAAG | Start: 1755 |
| Tm | 60.034 | 59.833 | End: 1947 |
| Size | 20 | 20 | 193 |
| Primer 5 details |
|---|
| Sequence | TCTTCAGGCCTTGCGATCAG | CGCATAACACGGCCTTTCTG | Start: 1919 |
| Tm | 60.108 | 59.903 | End: 2135 |
| Size | 20 | 20 | 217 |
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