ssr_primer
Primer Details for TRINITY_DN72291_c6_g1_i1 |
|---|
| (TATT)4(TATTTTTTTTTTTTTTGCATCTCGTCTCCATCCAACTTGAATCAAGCCTGCGACTGGAAGCCGTGAGAAATAAAGTATAAATAAAGCGGTGAAACCTGACACAATCTCTCCCGTTTAAAATCGTTTTTTATGCTTTTTTTTCTTTTTCGCCCCTTTAACCGGGGAAAAAGTATTGAAAGATTCGGAATTATCCGTTTATGTTTTATTCAACTCACACCTGGTGGTTTTTCTCCCTCTACTTTGTACACCTTTTTAAAAACCTTCAGCCTCCTGTAAAATGAAGCGTTGACTTTGGTAATAATATTAAAATTTAGGTTCCTCGTTAAATTTAGTTTAATTTGTTTTAAATCTAGCTTTTTATAACTGATGTGTAGATATAAGTGATATTAACTTTTCTCGATCCCTCTTTTATGTTATCTTCGATTAGGTCACTTTGATCCTCGGGAAACTTAATTTTAAAATTTTCAGAGCTTGAAGAGCATGTTTAAGAGTAAGGGCGTGCTCTAAAAAGAGCTGTAGATAATCGTATCTACTAAATTAAATCTAAATTTCTGATTTTTTTTTTTTTTTGAAAAGTTTAAAATATTATTTTGTCAATTTCTGGATAAATTTCTTTCAGAGAAGAAGA)(T)15: Primer 1 details |
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| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCCGGTTGTTCCCAGCTATT | TGTGTCAGGTTTCACCGCTT | Start: 550 |
| Tm | 60.034 | 60.107 | End: 686 |
| Size | 20 | 20 | 137 |
| Primer 2 details |
|---|
| Sequence | CCCGGTTGTTCCCAGCTATT | TTGTGTCAGGTTTCACCGCT | Start: 550 |
| Tm | 60.034 | 60.107 | End: 687 |
| Size | 20 | 20 | 138 |
| Primer 3 details |
|---|
| Sequence | GCTTCAATCGCACGTGACAG | AATAGCTGGGAACAACCGGG | Start: 396 |
| Tm | 60.179 | 60.034 | End: 569 |
| Size | 20 | 20 | 174 |
| Primer 4 details |
|---|
| Sequence | GCTTCAATCGCACGTGACAG | TTCCAGTCGCAGGCTTGATT | Start: 396 |
| Tm | 60.179 | 59.963 | End: 642 |
| Size | 20 | 20 | 247 |
| Primer 5 details |
|---|
| Sequence | ATGGTGCCGCGCTTTAAAAG | CTGTCACGTGCGATTGAAGC | Start: 252 |
| Tm | 60.109 | 60.179 | End: 415 |
| Size | 20 | 20 | 164 |
(T)15: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCCGGTTGTTCCCAGCTATT | TGTGTCAGGTTTCACCGCTT | Start: 550 |
| Tm | 60.034 | 60.107 | End: 686 |
| Size | 20 | 20 | 137 |
| Primer 2 details |
|---|
| Sequence | CCCGGTTGTTCCCAGCTATT | TTGTGTCAGGTTTCACCGCT | Start: 550 |
| Tm | 60.034 | 60.107 | End: 687 |
| Size | 20 | 20 | 138 |
| Primer 3 details |
|---|
| Sequence | GCTTCAATCGCACGTGACAG | AATAGCTGGGAACAACCGGG | Start: 396 |
| Tm | 60.179 | 60.034 | End: 569 |
| Size | 20 | 20 | 174 |
| Primer 4 details |
|---|
| Sequence | GCTTCAATCGCACGTGACAG | TTCCAGTCGCAGGCTTGATT | Start: 396 |
| Tm | 60.179 | 59.963 | End: 642 |
| Size | 20 | 20 | 247 |
| Primer 5 details |
|---|
| Sequence | ATGGTGCCGCGCTTTAAAAG | CTGTCACGTGCGATTGAAGC | Start: 252 |
| Tm | 60.109 | 60.179 | End: 415 |
| Size | 20 | 20 | 164 |
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