ssr_primers

ssr_primer

Primer Details for TRINITY_DN68487_c2_g1_i2
(A)16: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TGTTGTCCTTTTTGCGGCAA	AGAGCCCAGTCTCCTCAAGT	Start: 1851
Tm	59.467	59.884	End: 2020
Size	20	20	170
Primer 2 details
Sequence	TTGTTGTCCTTTTTGCGGCA	AGAGCCCAGTCTCCTCAAGT	Start: 1850
Tm	59.467	59.884	End: 2020
Size	20	20	171
Primer 3 details
Sequence	AGATGCAGAACGCCACAGAA	AGCTGAAGTTTCTCACCGGT	Start: 1568
Tm	59.965	59.241	End: 1671
Size	20	20	104
Primer 4 details
Sequence	AAGATGCAGAACGCCACAGA	AGCTGAAGTTTCTCACCGGT	Start: 1567
Tm	59.965	59.241	End: 1671
Size	20	20	105
Primer 5 details
Sequence	TCTCTAGGGGGCTCTCCAAA	AGAGCCCAGTCTCCTCAAGT	Start: 1895
Tm	59.283	59.884	End: 2020
Size	20	20	126
(A)10: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TGTTGTCCTTTTTGCGGCAA	AGAGCCCAGTCTCCTCAAGT	Start: 1851
Tm	59.467	59.884	End: 2020
Size	20	20	170
Primer 2 details
Sequence	TTGTTGTCCTTTTTGCGGCA	AGAGCCCAGTCTCCTCAAGT	Start: 1850
Tm	59.467	59.884	End: 2020
Size	20	20	171
Primer 3 details
Sequence	AGATGCAGAACGCCACAGAA	AGCTGAAGTTTCTCACCGGT	Start: 1568
Tm	59.965	59.241	End: 1671
Size	20	20	104
Primer 4 details
Sequence	AAGATGCAGAACGCCACAGA	AGCTGAAGTTTCTCACCGGT	Start: 1567
Tm	59.965	59.241	End: 1671
Size	20	20	105
Primer 5 details
Sequence	TCTCTAGGGGGCTCTCCAAA	AGAGCCCAGTCTCCTCAAGT	Start: 1895
Tm	59.283	59.884	End: 2020
Size	20	20	126
(A)12: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TGTTGTCCTTTTTGCGGCAA	AGAGCCCAGTCTCCTCAAGT	Start: 1851
Tm	59.467	59.884	End: 2020
Size	20	20	170
Primer 2 details
Sequence	TTGTTGTCCTTTTTGCGGCA	AGAGCCCAGTCTCCTCAAGT	Start: 1850
Tm	59.467	59.884	End: 2020
Size	20	20	171
Primer 3 details
Sequence	AGATGCAGAACGCCACAGAA	AGCTGAAGTTTCTCACCGGT	Start: 1568
Tm	59.965	59.241	End: 1671
Size	20	20	104
Primer 4 details
Sequence	AAGATGCAGAACGCCACAGA	AGCTGAAGTTTCTCACCGGT	Start: 1567
Tm	59.965	59.241	End: 1671
Size	20	20	105
Primer 5 details
Sequence	TCTCTAGGGGGCTCTCCAAA	AGAGCCCAGTCTCCTCAAGT	Start: 1895
Tm	59.283	59.884	End: 2020
Size	20	20	126
(A)10: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TGTTGTCCTTTTTGCGGCAA	AGAGCCCAGTCTCCTCAAGT	Start: 1851
Tm	59.467	59.884	End: 2020
Size	20	20	170
Primer 2 details
Sequence	TTGTTGTCCTTTTTGCGGCA	AGAGCCCAGTCTCCTCAAGT	Start: 1850
Tm	59.467	59.884	End: 2020
Size	20	20	171
Primer 3 details
Sequence	AGATGCAGAACGCCACAGAA	AGCTGAAGTTTCTCACCGGT	Start: 1568
Tm	59.965	59.241	End: 1671
Size	20	20	104
Primer 4 details
Sequence	AAGATGCAGAACGCCACAGA	AGCTGAAGTTTCTCACCGGT	Start: 1567
Tm	59.965	59.241	End: 1671
Size	20	20	105
Primer 5 details
Sequence	TCTCTAGGGGGCTCTCCAAA	AGAGCCCAGTCTCCTCAAGT	Start: 1895
Tm	59.283	59.884	End: 2020
Size	20	20	126
(A)16ctgacaaaagtgaaaatttcaaaaaataatcttctatggtttttcttt(A)10ggagacaacagcagagattgaaacatcgcaattaagaaacatgttttgcaatgttcatcattgataaattgaaagtattacaaagt(C)13: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TGTTGTCCTTTTTGCGGCAA	AGAGCCCAGTCTCCTCAAGT	Start: 1851
Tm	59.467	59.884	End: 2020
Size	20	20	170
Primer 2 details
Sequence	TTGTTGTCCTTTTTGCGGCA	AGAGCCCAGTCTCCTCAAGT	Start: 1850
Tm	59.467	59.884	End: 2020
Size	20	20	171
Primer 3 details
Sequence	AGATGCAGAACGCCACAGAA	AGCTGAAGTTTCTCACCGGT	Start: 1568
Tm	59.965	59.241	End: 1671
Size	20	20	104
Primer 4 details
Sequence	AAGATGCAGAACGCCACAGA	AGCTGAAGTTTCTCACCGGT	Start: 1567
Tm	59.965	59.241	End: 1671
Size	20	20	105
Primer 5 details
Sequence	TCTCTAGGGGGCTCTCCAAA	AGAGCCCAGTCTCCTCAAGT	Start: 1895
Tm	59.283	59.884	End: 2020
Size	20	20	126

BtChiLCVDb: Bemisia tabaci Asia II 1 transcriptome database in response to chilli leaf curl virus

Primer Details for TRINITY_DN68487_c2_g1_i2

ICAR Data Use Licence