ssr_primers

ssr_primer

Primer Details for TRINITY_DN66703_c2_g1_i1
(A)11: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TTCTCAGGCTCCGGTTTGAC	AGGAGGGGTGGTGTCTCTTT	Start: 949
Tm	59.965	60.104	End: 1112
Size	20	20	164
Primer 2 details
Sequence	GTTCTCAGGCTCCGGTTTGA	AGGAGGGGTGGTGTCTCTTT	Start: 948
Tm	59.965	60.104	End: 1112
Size	20	20	165
Primer 3 details
Sequence	ATGTTGTTCTCAGGCTCCGG	AGGAGGGGTGGTGTCTCTTT	Start: 943
Tm	60.036	60.104	End: 1112
Size	20	20	170
Primer 4 details
Sequence	TTCTCAGGCTCCGGTTTGAC	GTTTCTCGTGAAGTCGCTGC	Start: 949
Tm	59.965	59.838	End: 1084
Size	20	20	136
Primer 5 details
Sequence	GTTCTCAGGCTCCGGTTTGA	GTTTCTCGTGAAGTCGCTGC	Start: 948
Tm	59.965	59.838	End: 1084
Size	20	20	137
(A)10: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TTCTCAGGCTCCGGTTTGAC	AGGAGGGGTGGTGTCTCTTT	Start: 949
Tm	59.965	60.104	End: 1112
Size	20	20	164
Primer 2 details
Sequence	GTTCTCAGGCTCCGGTTTGA	AGGAGGGGTGGTGTCTCTTT	Start: 948
Tm	59.965	60.104	End: 1112
Size	20	20	165
Primer 3 details
Sequence	ATGTTGTTCTCAGGCTCCGG	AGGAGGGGTGGTGTCTCTTT	Start: 943
Tm	60.036	60.104	End: 1112
Size	20	20	170
Primer 4 details
Sequence	TTCTCAGGCTCCGGTTTGAC	GTTTCTCGTGAAGTCGCTGC	Start: 949
Tm	59.965	59.838	End: 1084
Size	20	20	136
Primer 5 details
Sequence	GTTCTCAGGCTCCGGTTTGA	GTTTCTCGTGAAGTCGCTGC	Start: 948
Tm	59.965	59.838	End: 1084
Size	20	20	137
(A)11: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TTCTCAGGCTCCGGTTTGAC	AGGAGGGGTGGTGTCTCTTT	Start: 949
Tm	59.965	60.104	End: 1112
Size	20	20	164
Primer 2 details
Sequence	GTTCTCAGGCTCCGGTTTGA	AGGAGGGGTGGTGTCTCTTT	Start: 948
Tm	59.965	60.104	End: 1112
Size	20	20	165
Primer 3 details
Sequence	ATGTTGTTCTCAGGCTCCGG	AGGAGGGGTGGTGTCTCTTT	Start: 943
Tm	60.036	60.104	End: 1112
Size	20	20	170
Primer 4 details
Sequence	TTCTCAGGCTCCGGTTTGAC	GTTTCTCGTGAAGTCGCTGC	Start: 949
Tm	59.965	59.838	End: 1084
Size	20	20	136
Primer 5 details
Sequence	GTTCTCAGGCTCCGGTTTGA	GTTTCTCGTGAAGTCGCTGC	Start: 948
Tm	59.965	59.838	End: 1084
Size	20	20	137
(A)12: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TTCTCAGGCTCCGGTTTGAC	AGGAGGGGTGGTGTCTCTTT	Start: 949
Tm	59.965	60.104	End: 1112
Size	20	20	164
Primer 2 details
Sequence	GTTCTCAGGCTCCGGTTTGA	AGGAGGGGTGGTGTCTCTTT	Start: 948
Tm	59.965	60.104	End: 1112
Size	20	20	165
Primer 3 details
Sequence	ATGTTGTTCTCAGGCTCCGG	AGGAGGGGTGGTGTCTCTTT	Start: 943
Tm	60.036	60.104	End: 1112
Size	20	20	170
Primer 4 details
Sequence	TTCTCAGGCTCCGGTTTGAC	GTTTCTCGTGAAGTCGCTGC	Start: 949
Tm	59.965	59.838	End: 1084
Size	20	20	136
Primer 5 details
Sequence	GTTCTCAGGCTCCGGTTTGA	GTTTCTCGTGAAGTCGCTGC	Start: 948
Tm	59.965	59.838	End: 1084
Size	20	20	137
(A)16: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TTCTCAGGCTCCGGTTTGAC	AGGAGGGGTGGTGTCTCTTT	Start: 949
Tm	59.965	60.104	End: 1112
Size	20	20	164
Primer 2 details
Sequence	GTTCTCAGGCTCCGGTTTGA	AGGAGGGGTGGTGTCTCTTT	Start: 948
Tm	59.965	60.104	End: 1112
Size	20	20	165
Primer 3 details
Sequence	ATGTTGTTCTCAGGCTCCGG	AGGAGGGGTGGTGTCTCTTT	Start: 943
Tm	60.036	60.104	End: 1112
Size	20	20	170
Primer 4 details
Sequence	TTCTCAGGCTCCGGTTTGAC	GTTTCTCGTGAAGTCGCTGC	Start: 949
Tm	59.965	59.838	End: 1084
Size	20	20	136
Primer 5 details
Sequence	GTTCTCAGGCTCCGGTTTGA	GTTTCTCGTGAAGTCGCTGC	Start: 948
Tm	59.965	59.838	End: 1084
Size	20	20	137
(A)10: Primer 1 details
Primer Characteristics	Forward Primer	Reverse Primer	Product Details
Sequence	TTCTCAGGCTCCGGTTTGAC	AGGAGGGGTGGTGTCTCTTT	Start: 949
Tm	59.965	60.104	End: 1112
Size	20	20	164
Primer 2 details
Sequence	GTTCTCAGGCTCCGGTTTGA	AGGAGGGGTGGTGTCTCTTT	Start: 948
Tm	59.965	60.104	End: 1112
Size	20	20	165
Primer 3 details
Sequence	ATGTTGTTCTCAGGCTCCGG	AGGAGGGGTGGTGTCTCTTT	Start: 943
Tm	60.036	60.104	End: 1112
Size	20	20	170
Primer 4 details
Sequence	TTCTCAGGCTCCGGTTTGAC	GTTTCTCGTGAAGTCGCTGC	Start: 949
Tm	59.965	59.838	End: 1084
Size	20	20	136
Primer 5 details
Sequence	GTTCTCAGGCTCCGGTTTGA	GTTTCTCGTGAAGTCGCTGC	Start: 948
Tm	59.965	59.838	End: 1084
Size	20	20	137

BtChiLCVDb: Bemisia tabaci Asia II 1 transcriptome database in response to chilli leaf curl virus

Primer Details for TRINITY_DN66703_c2_g1_i1

ICAR Data Use Licence