ssr_primer
Primer Details for TRINITY_DN64187_c0_g2_i2 |
|---|
| (G)11: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GTTACAGCAACGGCAGCAAA | CTATCCAGACCATCGGGCAC | Start: 3724 |
| Tm | 59.97 | 59.966 | End: 3831 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | TCGGAGGGAGTGGATCAGTT | TTTGCTGCCGTTGCTGTAAC | Start: 3524 |
| Tm | 59.959 | 59.97 | End: 3743 |
| Size | 20 | 20 | 220 |
| Primer 3 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CGTCGTTTCCTCAGTTCCGA | Start: 1811 |
| Tm | 60.033 | 60.04 | End: 2061 |
| Size | 20 | 20 | 251 |
| Primer 4 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CCCCAAGATGAAGGCCACTT | Start: 1811 |
| Tm | 60.033 | 59.96 | End: 1977 |
| Size | 20 | 20 | 167 |
| Primer 5 details |
|---|
| Sequence | AGCAACGGCAGCAAATTCAG | CTATCCAGACCATCGGGCAC | Start: 3729 |
| Tm | 60.039 | 59.966 | End: 3831 |
| Size | 20 | 20 | 103 |
(A)10gaaaaatataccttggttttggcatgaaactgccacaagaatattttcattccatacttttttttatgtgaacagtctttttcttacttttctaa(T)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GTTACAGCAACGGCAGCAAA | CTATCCAGACCATCGGGCAC | Start: 3724 |
| Tm | 59.97 | 59.966 | End: 3831 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | TCGGAGGGAGTGGATCAGTT | TTTGCTGCCGTTGCTGTAAC | Start: 3524 |
| Tm | 59.959 | 59.97 | End: 3743 |
| Size | 20 | 20 | 220 |
| Primer 3 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CGTCGTTTCCTCAGTTCCGA | Start: 1811 |
| Tm | 60.033 | 60.04 | End: 2061 |
| Size | 20 | 20 | 251 |
| Primer 4 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CCCCAAGATGAAGGCCACTT | Start: 1811 |
| Tm | 60.033 | 59.96 | End: 1977 |
| Size | 20 | 20 | 167 |
| Primer 5 details |
|---|
| Sequence | AGCAACGGCAGCAAATTCAG | CTATCCAGACCATCGGGCAC | Start: 3729 |
| Tm | 60.039 | 59.966 | End: 3831 |
| Size | 20 | 20 | 103 |
(CCT)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GTTACAGCAACGGCAGCAAA | CTATCCAGACCATCGGGCAC | Start: 3724 |
| Tm | 59.97 | 59.966 | End: 3831 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | TCGGAGGGAGTGGATCAGTT | TTTGCTGCCGTTGCTGTAAC | Start: 3524 |
| Tm | 59.959 | 59.97 | End: 3743 |
| Size | 20 | 20 | 220 |
| Primer 3 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CGTCGTTTCCTCAGTTCCGA | Start: 1811 |
| Tm | 60.033 | 60.04 | End: 2061 |
| Size | 20 | 20 | 251 |
| Primer 4 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CCCCAAGATGAAGGCCACTT | Start: 1811 |
| Tm | 60.033 | 59.96 | End: 1977 |
| Size | 20 | 20 | 167 |
| Primer 5 details |
|---|
| Sequence | AGCAACGGCAGCAAATTCAG | CTATCCAGACCATCGGGCAC | Start: 3729 |
| Tm | 60.039 | 59.966 | End: 3831 |
| Size | 20 | 20 | 103 |
(CAA)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GTTACAGCAACGGCAGCAAA | CTATCCAGACCATCGGGCAC | Start: 3724 |
| Tm | 59.97 | 59.966 | End: 3831 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | TCGGAGGGAGTGGATCAGTT | TTTGCTGCCGTTGCTGTAAC | Start: 3524 |
| Tm | 59.959 | 59.97 | End: 3743 |
| Size | 20 | 20 | 220 |
| Primer 3 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CGTCGTTTCCTCAGTTCCGA | Start: 1811 |
| Tm | 60.033 | 60.04 | End: 2061 |
| Size | 20 | 20 | 251 |
| Primer 4 details |
|---|
| Sequence | AGTGGGAAACAACCAAGGCA | CCCCAAGATGAAGGCCACTT | Start: 1811 |
| Tm | 60.033 | 59.96 | End: 1977 |
| Size | 20 | 20 | 167 |
| Primer 5 details |
|---|
| Sequence | AGCAACGGCAGCAAATTCAG | CTATCCAGACCATCGGGCAC | Start: 3729 |
| Tm | 60.039 | 59.966 | End: 3831 |
| Size | 20 | 20 | 103 |
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